Fauna on Flora

Matt and Emma are trying to plant a tree, but they first have to replace all of some words - then all of certain letters - to see it grow.

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Across

1Article
4Venetian official, or currency ticker
7Poet Cummings
9Machine part
12Donkey
15Jason who directed "Arthur"
17Harvard institution known for arch. and art
18Sentence structure common in modern Hebrew, abbr.
19Silent assent
20Greek mil. group of W.W. II
21Ticker of one of the mag. seven
23Prominent Chinese dissident
24German paramilitary organization during W.W. II
26"___ Doubtfire"
29*Having depth
33AL West team, on scoreboards
35What you will make after solving this crossword
36Say
37†Bed size
39Lentil dish
41Bog down
42Creative spark
45Lennon's wife
47Me and you
481982 science fiction film
49A simple sugar
53Take notice, abbr.
54County prosecutor, briefly
57Camera mode option, e.g. on iPhones
59"Say it isn't so!"
60Formatting lang.
62Smoke, for short
63Some car parts, abbr.
65Desc. for a relay that conducts electricity by default
67Strategy game with a 19x19 grid
68Rating system used in zero-sum games
69Type of checklist before surg., perhaps
71Suffix for a parent
72Commercials
74*21% of the atmosphere
77Dept. in charge of enforcing standards
78Some lubricants
81Flavor enhancer, for short
83Hawaii, e.g., abbr.
85Hard drive company, for short
87†Togetherness
89Call to a mate
91*Space effect, briefly
93It may be rigged
95AA hub
97Chinese company known for phones
100Last letter in Leeds
102British verb ending
103†Chinese organized crime group, or the unclued of which in 35A order form what you seek overall
104SW that manages computer HW
105Superlative suffix
107†Prefix with sexual
108*2016 gaming console refresh
109Letters on the tail of a Japanese plane
110Trade show
111Coloring agent

Down

1"Wow!"
2†2021 NCAA policy change subject
3Smitten
4French preposition
5TLD for nonprofits
6Component of Freud's psyche model
7Alt. investment strategy considering nontraditional factors
8Com. sex-related condition
9Freight railway company in the eastern US
10Roman poet
11Aspirations
12Small buffalo
13Japanese noodles
14Heliocentric NASA mission, abbr.
16What good citizens do
22Darn
25Puzzle type to look for next
27"Walkabout" director Nicolas
28Toddler's mishap
30Atomic symbol which doesn't share any letters with its element
31Larger transit planning agency near Chi.
32German article
34Sahara Las Vegas, form.
38Negative prefix
39†Bottom of a suit
40Half of A/V
43French for "of the"
44Early NATO alphabet letter
46Out of date, abbr., or a streaming software
50†___ Direction
51†Red cup brand
52Green prefix
55Atomic symbol which doesn't share any letters with its element
56Windows pred.
58Nursing cert.
59Orig.
61It might be O(log(n))
64Periodical, for short
66Popular STEM major
70Capitalist's goal
73Needing assembly, for short
74"good 4 u" singer Rodrigo
75Common compressed Linux archive extension
76"SmackDown!" org.
77Quid pro ___
79What a virus might cause cells to do
80Mil. rank
81Insane
82Common scripting file extension
84Flies like an eagle
86Scientific research facility in B.C. Can. that performed the first astronomical observations using VLBI
88Bugs Bunny adversary, for short
90Warning sign
92The original meme stk.
93Japanese soup
94IATA code for airport in Guilford County, NC
96Dept. for computer help
98B.C. neighbor
99Mac platform
101†Prefix with -chotomy
102Component of Freud's psyche model
106QB's goal
107To one side